I don't know if someone caught this and corrected him or not BUT, at least to my knowledge, you can't get a JK with manual windows but power locks. It's either no power locks/windows or power locks/windows. Maybe a dealership could order you some special one or something but I doubt it unless your dealership has some special in with a plant manager or some shit lol.
My '13 JK (2dr) doesn't have power windows/locks and to be honest, I sometimes miss it but it's never too far of a reach to get to the passenger side window to roll it down and I kinda like having that little cubby in the dash to put my iPhone while I'm driving lmao
Eventually though I'll have a JKU (I'm hoping for 'plum crazy' still!) and it'll have a hard top and power everything. I will never own another vehicle that doesn't have cruise control but IMO if you have a hard top you should have the amenities and if you have a soft top you should have the basics. I know thats stupid but thats how my brain works haha I definitely don't dog on people who have both or visa versa thats just how I think hahaha
My dream interior would be; cruise control, power windows, power locks, heated/cooled seats, saddle leather seats, basic radio (don't give a shit about bluetooth), and a hard top with a Spiderwedshade for when the tops off. I'm definitely a creature comforts kind of guy.