Sorry for all the short replies. I have my nephews around me and trying to get some stuff done on the weekend is pure organized insanity.
Here is how mine is set up.

I have a 2 door, 2009 Rubicon Normal not unlimited

I bought the 39516 Kit from Amazon.

I took off the muffler off. (Gibson- Sold it to ryanh_99) It was a diff back mod

Took off the long exhaust pipe that went over the axle to the clamp where the pipe has some sort of rivet for indexing ect..

I took off all the rubber isolators from the hangers

Took the new pipe that came with the kit and cut the end off that was farthest away from the welded on hanger rod. Also it was the end that DIDN'T have an indexing indention built in it. I added the

I took the skinny clamp that resembled the old on that was on there and reversed the bolt and nut and wedges. I am not about to get up in there and tightening that thing up. I am doing it from below. I left it lose so I can move the short pipe up down etc..

I added one of the fat clamps and stuck it on the muffler than pushed the muffler on the pipe.

Then at the tail end of the muffler I added the other fat clamp and the down turn pipe.
What doesn't match up is the holes from the hanger mount provided in the kit. It has two PERFECTLY spaced holes for the bolts but my frame has only one bolt hole that is threaded. The other hole is just a big oval hole.
Where the front of the intermediate pipe is the cross member has two hole spaced perfectly for that little metal hanger rob piece but I don't need it there.
The last piece (the exhaust turn down part with the hanger rod welded to it) I want to cut off the rob from the bottom of the piece and attach it to the top. It still doesn't solve my missing one bolt hole for the small bracket on the cross member.
I am cutting it tomorrow. Someone help me with the madness.